Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Haur_0018 | Haur_2226 | PFAM: regulatory protein TetR; KEGG: gvi:glr1417 TetR family transcriptional regulatory protein. | PFAM: regulatory protein TetR; KEGG: rca:Rcas_4171 transcriptional regulator, TetR family. | 0.498 |
Haur_2225 | Haur_2226 | Hypothetical protein. | PFAM: regulatory protein TetR; KEGG: rca:Rcas_4171 transcriptional regulator, TetR family. | 0.505 |
Haur_2225 | Haur_2227 | Hypothetical protein. | PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein. | 0.445 |
Haur_2226 | Haur_0018 | PFAM: regulatory protein TetR; KEGG: rca:Rcas_4171 transcriptional regulator, TetR family. | PFAM: regulatory protein TetR; KEGG: gvi:glr1417 TetR family transcriptional regulatory protein. | 0.498 |
Haur_2226 | Haur_2225 | PFAM: regulatory protein TetR; KEGG: rca:Rcas_4171 transcriptional regulator, TetR family. | Hypothetical protein. | 0.505 |
Haur_2226 | Haur_2227 | PFAM: regulatory protein TetR; KEGG: rca:Rcas_4171 transcriptional regulator, TetR family. | PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein. | 0.671 |
Haur_2226 | Haur_2434 | PFAM: regulatory protein TetR; KEGG: rca:Rcas_4171 transcriptional regulator, TetR family. | PFAM: regulatory protein TetR; KEGG: rpe:RPE_3675 transcriptional regulator, TetR family. | 0.488 |
Haur_2227 | Haur_2225 | PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein. | Hypothetical protein. | 0.445 |
Haur_2227 | Haur_2226 | PFAM: cytochrome P450; KEGG: mxa:MXAN_2304 cytochrome P450 family protein. | PFAM: regulatory protein TetR; KEGG: rca:Rcas_4171 transcriptional regulator, TetR family. | 0.671 |
Haur_2434 | Haur_2226 | PFAM: regulatory protein TetR; KEGG: rpe:RPE_3675 transcriptional regulator, TetR family. | PFAM: regulatory protein TetR; KEGG: rca:Rcas_4171 transcriptional regulator, TetR family. | 0.488 |