STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2372PFAM: cellulose-binding family II; KEGG: sco:SCO5786 secreted hydrolase. (842 aa)    
Predicted Functional Partners:
Haur_1418
Cellulose 1,4-beta-cellobiosidase; PFAM: glycoside hydrolase family 9; Carbohydrate-binding CenC domain protein; glycoside hydrolase family 9 domain protein Ig domain protein; KEGG: tfu:Tfu_1627 cellulase, cellulose 1,4-beta-cellobiosidase.
  
     0.744
Haur_0859
PFAM: Ricin B lectin; KEGG: sma:SAV1044 hydrolase.
  
     0.736
Haur_1518
KEGG: cbe:Cbei_2675 coagulation factor 5/8 type domain protein.
  
   
 0.717
Haur_4574
PFAM: Ricin B lectin; KEGG: sde:Sde_3710 arabinogalactan endo-1,4-beta-galactosidase.
  
     0.689
Haur_1428
PFAM: Ricin B lectin; glycoside hydrolase family 81; KEGG: tfu:Tfu_2130 hypothetical protein.
  
     0.679
Haur_2750
Chitinase; KEGG: sen:SACE_6558 chitinase II; PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
  
     0.621
Haur_2647
PFAM: Carbohydrate-binding family V/XII; chitin-binding domain 3 protein; KEGG: pap:PSPA7_4667 chitin-binding protein CbpD precursor.
  
     0.615
Haur_1626
PFAM: glycoside hydrolase family 26; KEGG: cth:Cthe_2811 glycoside hydrolase, family 26; Belongs to the glycosyl hydrolase 26 family.
  
     0.581
Haur_1818
PFAM: coagulation factor 5/8 type domain protein; Carbohydrate-binding family V/XII; Rare lipoprotein A; KEGG: rca:Rcas_2307 rare lipoprotein A.
  
   
 0.581
Haur_1140
PFAM: Rare lipoprotein A; KEGG: rrs:RoseRS_1550 rare lipoprotein A.
  
   
 0.569
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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