STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2397PFAM: extracellular solute-binding protein family 5; KEGG: mxa:MXAN_6551 putative oligopeptide/dipeptide ABC transporter, periplasmic oligopeptide/dipeptide-binding protein. (597 aa)    
Predicted Functional Partners:
Haur_2396
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0399 binding-protein-dependent transport systems inner membrane component.
 
 
 0.929
Haur_2395
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_0400 binding-protein-dependent transport systems inner membrane component.
 
 0.925
Haur_2394
KEGG: vvy:VV2737 peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.842
Haur_2393
KEGG: vvy:VVA0136 ABC-type oligopeptide transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
 0.823
Haur_1898
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1747 putative oligopeptide transport system permease protein.
 
 0.604
Haur_0368
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mma:MM_3320 oligopeptide transporter, permease protein.
 
 0.595
Haur_0369
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH2653 oligopeptide ABC transporter permease protein.
 
 0.574
Haur_1899
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tma:TM1748 putative oligopeptide transport system permease protein.
 
 0.563
Haur_3499
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_1060 binding-protein-dependent transport systems inner membrane component.
 
 0.562
Haur_2392
Beta-galactosidase; PFAM: glycoside hydrolase family 35; Glycoside hydrolase family 42 domain protein; KEGG: pfu:PF0363 beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
       0.553
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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