STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2431Licheninase; PFAM: glycoside hydrolase family 8; Carbohydrate-binding family V/XII; KEGG: bcz:BCZK2421 chitosanase; glycosyl hydrolase family 8; endoglucanase. (543 aa)    
Predicted Functional Partners:
Haur_2512
Cellulose-binding family II; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 16; cellulose-binding family II; Fibronectin type III domain protein; KEGG: sco:SCO6596 secreted protein.
 
   
 0.710
Haur_2177
Glycoside hydrolase family 18; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 18; SMART: chitinase II; KEGG: hch:HCH_05453 chitinase; Belongs to the glycosyl hydrolase 18 family.
   
 0.687
Haur_0296
PFAM: glycoside hydrolase family 9; cellulose-binding family II; type 3a cellulose-binding domain protein; KEGG: tfu:Tfu_2176 cellulase, cellulose 1,4-beta-cellobiosidase.
 
   
 0.488
Haur_2430
PFAM: GCN5-related N-acetyltransferase; KEGG: fno:Fnod_1206 GCN5-related N-acetyltransferase.
       0.480
Haur_2750
Chitinase; KEGG: sen:SACE_6558 chitinase II; PFAM: glycoside hydrolase family 18; Carbohydrate-binding family V/XII; SMART: chitinase II; Belongs to the glycosyl hydrolase 18 family.
   
0.477
Haur_2816
Glycoside hydrolase family 16; PFAM: coagulation factor 5/8 type domain protein; glycoside hydrolase family 16; PT repeat-containing protein; KEGG: sma:SAV1800 secreted protein.
 
     0.473
Haur_1598
Hypothetical protein; KEGG: cme:CMH001C similar to hedgehog protein Pfam: Kelch_2 Kelch_1 Hint PROSITE: INTEIN_N_TER PRO_RICH THR_RICH.
  
     0.438
Haur_1831
SMART: leucine-rich repeat-containing protein typical subtype; KEGG: lil:LA2447 outermembrane protein.
  
     0.409
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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