STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2504PFAM: aldehyde dehydrogenase; KEGG: xcb:XC_1702 ketoglutarate semialdehyde dehydrogenase. (523 aa)    
Predicted Functional Partners:
Haur_2499
PFAM: proline racemase; KEGG: bxe:Bxe_B0874 putative proline racemase; Belongs to the proline racemase family.
 
 
 
 0.940
Haur_2503
PFAM: dihydrodipicolinate synthetase; KEGG: mxa:MXAN_6203 dihydrodipicolinate synthase family protein; Belongs to the DapA family.
 
  
 0.937
Haur_3867
PFAM: aldehyde dehydrogenase; KEGG: rca:Rcas_1222 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 
0.923
Haur_2502
PFAM: FAD dependent oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pfl:PFL_1409 pyridine nucleotide-disulphide oxidoreductase family protein.
  
 0.886
Haur_2500
PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: pae:PA1267 hypothetical protein.
 
  
 0.878
Haur_0037
PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: rrs:RoseRS_1551 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
   
 0.868
Haur_2501
KEGG: xcv:XCV2746 sarcosine oxidase alpha subunit.
 
   
 0.832
Haur_0133
PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: rxy:Rxyl_2072 isocitrate/isopropylmalate dehydrogenase.
   
 0.821
Haur_1453
PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: det:DET0450 isocitrate dehydrogenase, putative.
   
 0.821
Haur_0038
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: rca:Rcas_2309 thiamine pyrophosphate protein domain protein TPP-binding.
     
 0.815
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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