STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2533PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein. (798 aa)    
Predicted Functional Partners:
Haur_1113
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2811 tetratricopeptide TPR_2.
  
     0.671
Haur_3681
Transcriptional regulator, SARP family; PFAM: transcriptional activator domain; Helix-turn-helix type 11 domain protein; KEGG: pol:Bpro_1406 transcriptional activator domain.
 
    0.665
Haur_1112
PFAM: NB-ARC domain protein; KEGG: gvi:glr2723 unknown protein.
  
     0.637
Haur_3040
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: rca:Rcas_0525 serine/threonine protein kinase with TPR repeats.
 
      0.591
Haur_3683
PFAM: TPR repeat-containing protein; transcriptional activator domain; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_4424 transcriptional activator domain.
 
    0.537
Haur_4724
PFAM: transcriptional activator domain; KEGG: rrs:RoseRS_4327 transcriptional activator domain.
 
    0.533
Haur_2532
PFAM: PGAP1 family protein; KEGG: sth:STH609 putative lipase.
       0.518
Haur_3508
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_3789 tetratricopeptide TPR_2 repeat protein.
  
     0.489
Haur_1521
KEGG: bbt:BBta_6235 hypothetical protein.
  
     0.414
Haur_4836
PFAM: regulatory protein TetR; KEGG: nfa:nfa44560 putative transcriptional regulator.
  
     0.414
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.