STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2570KEGG: rca:Rcas_3341 hypothetical protein. (181 aa)    
Predicted Functional Partners:
Haur_2569
PFAM: aminotransferase class-III; KEGG: tpe:Tpen_0539 acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.547
Haur_2571
PFAM: protein of unknown function DUF34; KEGG: pfu:PF1065 hypothetical protein.
       0.489
Haur_2572
KEGG: rrs:RoseRS_4213 membrane protein TerC possibly involved in tellurium resistance-like protein.
       0.489
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.