Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Haur_0888 | Haur_2598 | PFAM: glycoside hydrolase family 5; KEGG: tma:TM1752 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | KEGG: cps:CPS_0111 hypothetical protein. | 0.440 |
Haur_0888 | Haur_2820 | PFAM: glycoside hydrolase family 5; KEGG: tma:TM1752 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | PFAM: glycoside hydrolase family 5; cellulose-binding family II; KEGG: tfu:Tfu_2712 similar to endoglucanase. | 0.915 |
Haur_0888 | Haur_4805 | PFAM: glycoside hydrolase family 5; KEGG: tma:TM1752 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | PFAM: glycoside hydrolase family 10; cellulose-binding family II; KEGG: tma:TM0070 endo-1,4-beta-xylanase B. | 0.572 |
Haur_0966 | Haur_2598 | KEGG: noc:Noc_0728 hypothetical protein. | KEGG: cps:CPS_0111 hypothetical protein. | 0.459 |
Haur_1811 | Haur_2598 | KEGG: noc:Noc_0728 hypothetical protein. | KEGG: cps:CPS_0111 hypothetical protein. | 0.466 |
Haur_1970 | Haur_2598 | KEGG: noc:Noc_0728 hypothetical protein. | KEGG: cps:CPS_0111 hypothetical protein. | 0.455 |
Haur_2348 | Haur_2598 | PFAM: FAD dependent oxidoreductase; KEGG: dge:Dgeo_0210 FAD dependent oxidoreductase. | KEGG: cps:CPS_0111 hypothetical protein. | 0.479 |
Haur_2595 | Haur_2596 | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1701 glycosyl transferase family 2. | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1700 glycosyl transferase family 2. | 0.833 |
Haur_2595 | Haur_2597 | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1701 glycosyl transferase family 2. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.803 |
Haur_2595 | Haur_2598 | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1701 glycosyl transferase family 2. | KEGG: cps:CPS_0111 hypothetical protein. | 0.592 |
Haur_2596 | Haur_2595 | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1700 glycosyl transferase family 2. | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1701 glycosyl transferase family 2. | 0.833 |
Haur_2596 | Haur_2597 | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1700 glycosyl transferase family 2. | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.931 |
Haur_2596 | Haur_2598 | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1700 glycosyl transferase family 2. | KEGG: cps:CPS_0111 hypothetical protein. | 0.592 |
Haur_2597 | Haur_2595 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1701 glycosyl transferase family 2. | 0.803 |
Haur_2597 | Haur_2596 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_1700 glycosyl transferase family 2. | 0.931 |
Haur_2597 | Haur_2598 | dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | KEGG: cps:CPS_0111 hypothetical protein. | 0.586 |
Haur_2598 | Haur_0888 | KEGG: cps:CPS_0111 hypothetical protein. | PFAM: glycoside hydrolase family 5; KEGG: tma:TM1752 endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.440 |
Haur_2598 | Haur_0966 | KEGG: cps:CPS_0111 hypothetical protein. | KEGG: noc:Noc_0728 hypothetical protein. | 0.459 |
Haur_2598 | Haur_1811 | KEGG: cps:CPS_0111 hypothetical protein. | KEGG: noc:Noc_0728 hypothetical protein. | 0.466 |
Haur_2598 | Haur_1970 | KEGG: cps:CPS_0111 hypothetical protein. | KEGG: noc:Noc_0728 hypothetical protein. | 0.455 |
page 1 of 2