STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2612PFAM: CobB/CobQ domain protein glutamine amidotransferase; KEGG: rca:Rcas_1484 CobB/CobQ domain protein glutamine amidotransferase. (245 aa)    
Predicted Functional Partners:
Haur_3614
PFAM: Mur ligase middle domain protein; domain of unknown function DUF1727; KEGG: rrs:RoseRS_0500 domain of unknown function DUF1727.
 0.999
Haur_3511
PFAM: Glycosyltransferase 28 domain; KEGG: rrs:RoseRS_3786 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase.
     
 0.905
Haur_0083
PFAM: Methicillin resistance protein; KEGG: rca:Rcas_1415 methicillin resistance protein.
     
  0.900
Haur_0617
TIGRFAM: cyanophycin synthetase; PFAM: phosphoribosylglycinamide synthetase; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; RimK domain protein ATP-grasp; KEGG: cps:CPS_1871 cyanophycin synthetase.
  
 
 0.818
murE
UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
  
 
 0.798
Haur_3565
PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: pnu:Pnuc_0670 cyanophycin synthetase.
  
 
 0.798
Haur_2613
Hypothetical protein.
       0.709
Haur_0339
KEGG: rrs:RoseRS_1703 hypothetical protein.
  
 
 0.699
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
  0.520
Haur_2989
TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; KEGG: oih:OB0702 para-aminobenzoate synthetase component I.
    
  0.501
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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