STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2672PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA4366 ABC transporter, ATP-binding protein. (300 aa)    
Predicted Functional Partners:
Haur_2673
KEGG: mba:Mbar_A1046 putative ABC-2 type transport system permease protein.
  
 0.962
Haur_2674
ABC-type Na+ efflux pump permease component-like; KEGG: mac:MA4365 conserved hypothetical protein.
 
  
 0.961
Haur_1468
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2431 ABC transporter related.
 
    
0.913
Haur_2425
KEGG: deb:DehaBAV1_0771 ABC-type Na+ efflux pump permease component-like protein.
 
  
 0.838
Haur_3327
ABC-type Na+ efflux pump permease component-like; KEGG: mac:MA4365 conserved hypothetical protein.
 
  
 0.834
Haur_1054
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: slo:Shew_0712 ABC transporter-related protein.
 
    
0.801
Haur_2097
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_0995 ABC transporter related.
  
     0.541
Haur_2675
PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: oih:OB1081 acylaminoacyl-peptidase.
       0.468
Haur_2671
PFAM: DNA/RNA non-specific endonuclease; KEGG: gvi:glr0075 sugar-non-specific nuclease NucA homolog.
       0.458
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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