STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2801PFAM: protein of unknown function UPF0118; KEGG: btl:BALH_3975 possible permease. (402 aa)    
Predicted Functional Partners:
Haur_2800
PFAM: protein of unknown function UPF0118; KEGG: syf:Synpcc7942_1113 hypothetical protein.
 
    
0.846
Haur_3424
PFAM: protein of unknown function UPF0118; KEGG: rrs:RoseRS_1556 protein of unknown function UPF0118.
  
     0.751
Haur_2802
PFAM: ribonuclease BN; KEGG: ana:alr3393 similar to serum-resistance protein BrkB.
  
    0.652
Haur_2803
Hypothetical protein; KEGG: osa:4324628 Os01g0750600.
       0.611
Haur_2798
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: rca:Rcas_3032 integral membrane sensor signal transduction histidine kinase.
       0.482
Haur_2799
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: rrs:RoseRS_2290 two component transcriptional regulator, winged helix family.
       0.482
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.