STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2853PFAM: peptidase C2 calpain; KEGG: ana:all1084 unknown protein; Belongs to the WXG100 family. (361 aa)    
Predicted Functional Partners:
Haur_2854
Hypothetical protein.
       0.773
Haur_4763
PFAM: Poly(ADP-ribose) polymerase catalytic region; WGR domain protein; KEGG: xla:734426 hypothetical protein MGC115350.
  
     0.760
Haur_4538
KEGG: mgr:MGCH7_ch7g753 hypothetical protein.
  
     0.686
Haur_0136
PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: ani:AN9426.2 hypothetical protein Pfam: PNP_UDP_1 NB-ARC NACHT DegS Laminin_I TPR_1 TPR_2 TPR_4 TPR_3.
  
     0.660
Haur_2633
Hypothetical protein; KEGG: afm:AFUA_1G13230 conserved hypothetical protein.
  
     0.632
Haur_1438
PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: ncr:NCU05160.1 hypothetical protein.
  
   
 0.613
Haur_2257
Tetratricopeptide TPR_4; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: ani:AN9426.2 hypothetical protein Pfam: PNP_UDP_1 NB-ARC NACHT DegS Laminin_I TPR_1 TPR_2 TPR_4 TPR_3.
  
     0.557
Haur_0884
Beta-mannosidase; PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 sugar binding; KEGG: rrs:RoseRS_1576 beta-mannosidase.
  
     0.540
Haur_2040
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rrs:RoseRS_0641 tetratricopeptide TPR_2 repeat protein.
  
     0.520
Haur_2542
PFAM: Patatin; KEGG: har:HEAR2202 putative patatin-related protein.
  
     0.520
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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