STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2902KEGG: stp:Strop_4401 hypothetical protein. (269 aa)    
Predicted Functional Partners:
Haur_3811
PFAM: cobalt transport protein; KEGG: stp:Strop_4399 cobalt transport protein.
 
 
 0.990
Haur_0231
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ace:Acel_0943 ABC transporter related.
 
 0.962
Haur_2440
PFAM: cobalt transport protein; KEGG: rrs:RoseRS_1922 cobalt transport protein.
  
 
 0.959
Haur_2441
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_4124 ABC transporter related.
 
 0.950
Haur_1156
PFAM: BioY protein; KEGG: ttj:TTHA0904 biotin biosynthesis protein BioY.
   
 
 0.931
Haur_3810
Hypothetical protein; KEGG: rca:Rcas_0423 integrin alpha beta-propellor repeat protein.
 
     0.786
Haur_3809
KEGG: afu:AF1398 hypothetical protein.
 
     0.778
Haur_2903
Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.
       0.773
Haur_4509
KEGG: afu:AF1398 hypothetical protein.
 
     0.770
Haur_2904
Transcriptional regulator, TraR/DksA family; KEGG: bcl:ABC1986 general stress protein GSP160.
       0.701
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.