STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_2932PFAM: NMT1/THI5 like domain protein; KEGG: pna:Pnap_2656 multi-sensor signal transduction histidine kinase. (344 aa)    
Predicted Functional Partners:
Haur_0797
TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: maq:Maqu_3846 diguanylate cyclase.
 
      0.893
Haur_1136
Diguanylate cyclase; KEGG: bba:Bd3766 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein.
 
      0.889
Haur_1578
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rca:Rcas_2389 binding-protein-dependent transport systems inner membrane component.
  
 0.874
Haur_1108
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; KEGG: ana:all0219 hypothetical protein.
      0.853
Haur_0630
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: syn:slr0359 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
    
 0.820
Haur_0985
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: ana:all0219 hypothetical protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; EAL domain protein; response regulator receiver; PAS fold domain protein; SMART: PAS domain containing protein.
     0.817
Haur_4515
PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: mag:amb1112 signal transduction histidine kinase.
 
      0.664
Haur_2787
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: pna:Pnap_2417 binding-protein-dependent transport systems inner membrane component.
 
  
 0.642
Haur_2337
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kpn:KPN_02222 putative nitrate transporter component; NasE.
 
  
 0.592
Haur_0819
Signal transduction histidine kinase, nitrogen specific, NtrB; KEGG: rrs:RoseRS_1897 GAF sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
 
      0.584
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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