STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3003PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2978 ABC transporter related. (271 aa)    
Predicted Functional Partners:
Haur_3004
PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_2030 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
Haur_2680
PFAM: inner-membrane translocator; KEGG: bxe:Bxe_C0096 ABC branched chain amino acid family transporter, fused inner membrane subunits; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
Haur_3800
PFAM: inner-membrane translocator; KEGG: sth:STH2196 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.998
Haur_3005
PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_2031 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
Haur_3802
PFAM: inner-membrane translocator; KEGG: sth:STH2195 branched-chain amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.987
Haur_3006
PFAM: Extracellular ligand-binding receptor; KEGG: rxy:Rxyl_2032 extracellular ligand-binding receptor.
 
 
 0.986
Haur_2323
PFAM: Extracellular ligand-binding receptor; KEGG: mxa:MXAN_6665 putative branched chain amino acid ABC transporter, periplasmic amino acid-binding protein.
 
 
 0.977
Haur_2268
PFAM: Extracellular ligand-binding receptor; KEGG: pla:Plav_1972 extracellular ligand-binding receptor.
 
 
 0.975
Haur_3805
KEGG: rrs:RoseRS_4104 extracellular ligand-binding receptor.
 
 
 0.950
Haur_3804
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4105 ABC transporter related.
  
  
 
0.910
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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