STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3019Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: oih:OB0905 transcriptional regulator (Fur family); Belongs to the Fur family. (144 aa)    
Predicted Functional Partners:
Haur_4031
PFAM: regulatory protein MarR; iron dependent repressor; FeoA family protein; KEGG: rrs:RoseRS_3986 FeoA family protein.
  
  
 0.613
Haur_4545
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: rrs:RoseRS_1293 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
     0.600
Haur_0414
PFAM: regulatory protein DeoR; KEGG: rca:Rcas_0303 transcriptional regulator, TrmB.
  
    0.553
Haur_3018
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: rrs:RoseRS_0463 heavy metal translocating P-type ATPase.
     
 0.531
Haur_4825
PFAM: CoA-binding domain protein; KEGG: rca:Rcas_3783 CoA-binding domain protein.
  
    0.514
Haur_0514
KEGG: hch:HCH_06994 predicted ATPase/kinase involved in NAD metabolism.
  
    0.469
Haur_2073
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: rca:Rcas_3901 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
     0.457
Haur_3020
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: rrs:RoseRS_3876 multi-sensor hybrid histidine kinase.
     
 0.442
rpoA
DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
   0.441
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.432
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.