STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3073PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rrs:RoseRS_1712 alpha amylase, catalytic region. (477 aa)    
Predicted Functional Partners:
Haur_0096
TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: art:Arth_3767 alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.992
Haur_2912
KEGG: rca:Rcas_2645 4-alpha-glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77.
 
 
 0.991
Haur_4065
Alpha-amylase; KEGG: stp:Strop_2001 alpha-amylase; PFAM: glycoside hydrolase starch-binding; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain.
 
  
 0.936
Haur_2969
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gka:GK0707 alpha-amylase.
  
  
 
0.927
Haur_1148
KEGG: rrs:RoseRS_4181 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35.
  
 0.923
Haur_2435
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cbe:Cbei_4136 alpha amylase, catalytic region.
  
  
 
0.923
Haur_2828
KEGG: mxa:MXAN_3684 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain.
 
  
 
0.923
Haur_2545
Alpha-glucosidase; PFAM: glycoside hydrolase family 31; KEGG: ana:alr4773 alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.918
Haur_3705
PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: asa:ASA_0164 maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
  
  
 
0.916
Haur_4461
PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: pfu:PF1393 hypothetical protein; Belongs to the glycosyl hydrolase 57 family.
     
 0.902
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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