STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3125PFAM: isochorismatase hydrolase; KEGG: sma:SAV1388 isochorismatase family protein. (213 aa)    
Predicted Functional Partners:
Haur_3126
FAD linked oxidase domain protein; PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; FAD linked oxidase domain protein; KEGG: rrs:RoseRS_3858 FAD linked oxidase domain protein.
       0.773
Haur_2448
PFAM: isochorismatase hydrolase; KEGG: art:Arth_0076 isochorismatase hydrolase.
  
     0.720
nnrE
Carbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...]
  
    0.475
Haur_3128
PFAM: glycosyl transferase group 1; KEGG: sus:Acid_4714 thioesterase.
  
    0.443
Haur_3129
TIGRFAM: amino acid adenylation domain; PFAM: alpha/beta hydrolase fold; AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; major facilitator superfamily MFS_1; KEGG: cth:Cthe_1904 amino acid adenylation domain.
     
 0.439
Haur_4289
NAD+ synthetase; KEGG: ttj:TTHA1900 NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; NAD synthase; ExsB family protein.
  
 
 0.437
Haur_3127
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: ava:Ava_4099 non-ribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
       0.424
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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