STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3330Transcriptional regulator, ArsR family; PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein ArsR; KEGG: rca:Rcas_2315 transcriptional regulator, ArsR family. (257 aa)    
Predicted Functional Partners:
Haur_3331
KEGG: ava:Ava_3715 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 0.841
Haur_3284
PFAM: beta-lactamase domain protein; SMART: Rhodanese domain protein; KEGG: nph:NP2670A homolog 4 to thiosulfate sulfurtransferase / hydrolase (probable hydroxyacylglutathione hydrolase) 2.
  
 
 0.835
Haur_1643
PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: gka:GK2088 hypothetical protein.
  
 
 0.829
Haur_3332
PFAM: major facilitator superfamily MFS_1; KEGG: hch:HCH_04654 permease of the major facilitator superfamily.
     
 0.782
Haur_3329
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rle:RL4235 putative short-chain dehydrogenase/reductase.
  
 
 0.543
Haur_1873
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: ana:alr2679 polyketide synthase.
  
 
 0.536
Haur_2008
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: rpc:RPC_3036 amino acid adenylation.
  
 
 0.525
Haur_3333
Hypothetical protein.
       0.511
Haur_2346
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rhodanese domain protein; pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD dependent oxidoreductase; KEGG: pdi:BDI_0541 pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.508
Haur_4527
PFAM: Arsenical pump membrane protein; Citrate transporter; KEGG: det:DET0908 arsenical pump membrane protein, putative.
  
  
 0.462
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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