STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3386KEGG: rrs:RoseRS_2667 hypothetical protein. (281 aa)    
Predicted Functional Partners:
Haur_3387
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2666 ABC transporter related.
       0.771
Haur_3388
KEGG: rrs:RoseRS_2665 hypothetical protein.
       0.770
Haur_3385
KEGG: rrs:RoseRS_2668 NADH ubiquinone oxidoreductase, 20 kDa subunit.
       0.766
Haur_3389
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: rrs:RoseRS_3300 glycerol-3-phosphate dehydrogenase.
       0.757
Haur_3384
KEGG: rrs:RoseRS_3991 hypothetical protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
       0.505
Haur_3390
Multi-sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; SMART: PAS domain containing protein; KEGG: gur:Gura_0008 multi-sensor signal transduction histidine kinase.
       0.467
Haur_3391
Two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: mta:Moth_0070 two component transcriptional regulator, winged helix family.
       0.467
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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