STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3821PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rca:Rcas_3056 methyltransferase type 11. (203 aa)    
Predicted Functional Partners:
Haur_3822
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_2423 methyltransferase type 11.
 
     0.859
Haur_3820
KEGG: bch:Bcen2424_1858 hypothetical protein.
       0.773
Haur_3900
PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_3870 glycosyl transferase, family 2.
 
    0.769
Haur_4210
PFAM: von Willebrand factor type A; KEGG: rca:Rcas_3275 von Willebrand factor type A.
  
     0.469
Haur_3818
KEGG: rrs:RoseRS_3206 hypothetical protein.
       0.465
Haur_0456
PFAM: Methyltransferase type 11; KEGG: rca:Rcas_2343 methyltransferase type 11.
  
     0.455
Haur_4043
PFAM: von Willebrand factor type A; KEGG: rca:Rcas_2162 von Willebrand factor type A.
  
     0.421
Haur_1569
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ade:Adeh_2107 methyltransferase type 11.
  
     0.417
Haur_4283
Methyltransferase type 11; PFAM: Methionine biosynthesis MetW protein; Methyltransferase type 11; Methyltransferase type 12; KEGG: rrs:RoseRS_1837 methyltransferase type 12.
  
     0.416
Haur_0090
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3987 tetratricopeptide TPR_2 repeat protein.
 
     0.408
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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