STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3841KEGG: rrs:RoseRS_2802 hypothetical protein. (1140 aa)    
Predicted Functional Partners:
Haur_1752
KEGG: lic:LIC12561 hypothetical protein.
  
   0.523
Haur_3840
Hypothetical protein.
       0.510
Haur_3842
PFAM: protein of unknown function YGGT; KEGG: rca:Rcas_2905 protein of unknown function YGGT.
       0.493
Haur_1286
SMART: Protein-tyrosine phosphatase, catalytic; KEGG: sfu:Sfum_3916 dual specificity protein phosphatase.
  
     0.432
Haur_0332
Hypothetical protein; KEGG: sfu:Sfum_3677 FG-GAP repeat protein.
  
     0.430
Haur_4149
Hypothetical protein; KEGG: rrs:RoseRS_3509 terpene synthase, metal-binding domain protein.
  
     0.426
Haur_1618
KEGG: ava:Ava_4013 hypothetical protein.
  
     0.422
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.