STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3975PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pho:PH0913 ABC-2 type transport system ATP-binding protein. (319 aa)    
Predicted Functional Partners:
Haur_3976
PFAM: ABC-2 type transporter; KEGG: pfu:PF1887 putative ABC-2 type transport system permease protein.
 
    0.822
Haur_2097
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmy:Pmen_0995 ABC transporter related.
  
    0.771
Haur_3003
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_2978 ABC transporter related.
     
0.696
Haur_3804
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rrs:RoseRS_4105 ABC transporter related.
    
0.647
Haur_3974
Oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase; KEGG: ana:alr2045 putative thioesterase.
       0.628
Haur_3973
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: nfa:nfa50330 putative non-ribosomal peptide synthetase.
     
 0.604
cysS-2
KEGG: rca:Rcas_4315 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
     0.588
Haur_4230
PFAM: ABC-2 type transporter; KEGG: deh:cbdb_A774 ABC transporter, permease protein.
  
    0.579
hisZ
Histidine--tRNA ligase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.
 
     0.578
Haur_3977
TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: rrs:RoseRS_2359 phospho-2-dehydro-3-deoxyheptonate aldolase.
       0.534
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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