STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_3977TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: rrs:RoseRS_2359 phospho-2-dehydro-3-deoxyheptonate aldolase. (291 aa)    
Predicted Functional Partners:
aroB
Shikimate kinase., 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ); Belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family.
 
 
 0.983
Haur_1553
PFAM: 3-dehydroquinate synthase; KEGG: dge:Dgeo_2474 3-dehydroquinate synthase.
 
 
 0.951
pheA
PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: rca:Rcas_1552 prephenate dehydratase.
 
  
 0.916
Haur_3976
PFAM: ABC-2 type transporter; KEGG: pfu:PF1887 putative ABC-2 type transport system permease protein.
       0.551
Haur_3975
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pho:PH0913 ABC-2 type transport system ATP-binding protein.
       0.534
aroE
Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
 
  
 0.495
Haur_3974
Oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase; KEGG: ana:alr2045 putative thioesterase.
       0.443
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
  
  
 0.409
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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