STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4108Hypothetical protein. (143 aa)    
Predicted Functional Partners:
Haur_4109
Putative transcriptional regulator, PucR family; KEGG: rrs:RoseRS_0141 transcriptional regulator, CdaR.
       0.545
Haur_4107
Hypothetical protein.
       0.513
Haur_4106
PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: rca:Rcas_0031 adenylate/guanylate cyclase.
       0.504
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.