STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4148PFAM: GCN5-related N-acetyltransferase; KEGG: ana:alr8066 hypothetical protein. (284 aa)    
Predicted Functional Partners:
Haur_4147
Hypothetical protein.
       0.773
Haur_4149
Hypothetical protein; KEGG: rrs:RoseRS_3509 terpene synthase, metal-binding domain protein.
 
     0.662
Haur_3419
PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: atc:AGR_C_1212 hypothetical protein.
  
    0.606
Haur_1961
KEGG: sco:SCO0559 hypothetical protein.
  
     0.534
Haur_2086
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH1427 ABC transporter ATP-binding protein.
  
     0.531
Haur_0436
PFAM: protein of unknown function DUF990; KEGG: cpr:CPR_0170 hypothetical protein.
 
     0.511
Haur_2270
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: sco:SCO7250 hypothetical protein.
 
     0.499
Haur_2509
PFAM: GCN5-related N-acetyltransferase; KEGG: aau:AAur_1771 acetyltransferase, GNAT family protein.
  
     0.494
Haur_0434
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH2664 ABC transporter ATP-binding protein.
 
     0.493
Haur_4150
PFAM: GCN5-related N-acetyltransferase; KEGG: rrs:RoseRS_3838 GCN5-related N-acetyltransferase.
 
     0.490
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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