STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4313PFAM: NUDIX hydrolase; KEGG: bay:RBAM_005720 hypothetical protein. (153 aa)    
Predicted Functional Partners:
Haur_4311
PFAM: NUDIX hydrolase; KEGG: ssu:SSU05_1020 NTP pyrophosphohydrolase including oxidative damage repair enzymes.
 
     0.802
Haur_4312
PFAM: protein kinase; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: rrs:RoseRS_4604 protein kinase.
       0.773
Haur_4310
Hypothetical protein.
       0.568
Haur_4314
PFAM: glycosyl transferase family 2; KEGG: rca:Rcas_2745 glycosyl transferase family 2.
       0.505
Haur_4315
TIGRFAM: mevalonate kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rrs:RoseRS_2135 mevalonate kinase.
       0.501
Haur_3328
PFAM: NUDIX hydrolase; KEGG: btl:BALH_2416 MutT/NUDIX family protein; Belongs to the Nudix hydrolase family.
  
     0.445
Haur_4309
KEGG: rca:Rcas_2101 hypothetical protein.
       0.408
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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