STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4348PFAM: iron-containing alcohol dehydrogenase; KEGG: rrs:RoseRS_2082 iron-containing alcohol dehydrogenase. (385 aa)    
Predicted Functional Partners:
Haur_2524
PFAM: aldehyde dehydrogenase; KEGG: mxa:MXAN_0625 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.954
Haur_2951
Alcohol dehydrogenase zinc-binding domain protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mfa:Mfla_2206 alcohol dehydrogenase, zinc-binding.
  
 0.951
Haur_3788
PFAM: aldehyde dehydrogenase; KEGG: rrs:RoseRS_0265 aldehyde dehydrogenase (NAD(+)); Belongs to the aldehyde dehydrogenase family.
 
 0.947
Haur_1159
PFAM: aldehyde dehydrogenase; KEGG: mxa:MXAN_5040 aldehyde dehydrogenase family protein; Belongs to the aldehyde dehydrogenase family.
 
 0.935
Haur_3794
PFAM: aldehyde dehydrogenase; KEGG: mes:Meso_0313 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.923
Haur_3830
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rrs:RoseRS_4028 short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 0.905
Haur_4347
KEGG: rca:Rcas_1618 hypothetical protein.
       0.773
Haur_2223
KEGG: rca:Rcas_0831 hypothetical protein.
 
      0.692
Haur_1529
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: yen:YE0810 L-sorbose 1-phosphate reductase.
  
 
 0.685
Haur_2865
PFAM: Radical SAM domain protein; KEGG: rca:Rcas_3524 pyruvate-formate lyase-activating enzyme-like protein.
  
  
 0.594
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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