STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4514PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: rrs:RoseRS_2839 Orn/DAP/Arg decarboxylase 2. (576 aa)    
Predicted Functional Partners:
Haur_4857
TIGRFAM: putative agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: pub:SAR11_0206 arginase; Belongs to the arginase family.
 
 
 0.945
Haur_1230
Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rca:Rcas_1461 arginase; Belongs to the arginase family.
  
 
 0.933
argH
TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: rrs:RoseRS_2403 argininosuccinate lyase.
     
 0.839
Haur_3346
PFAM: deoxyhypusine synthase; KEGG: rrs:RoseRS_1218 deoxyhypusine synthase.
 
     0.635
Haur_2664
PFAM: peptidase M14 carboxypeptidase A; KEGG: rca:Rcas_3329 peptidase M14 carboxypeptidase A.
 
     0.615
Haur_0090
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rca:Rcas_3987 tetratricopeptide TPR_2 repeat protein.
  
    0.556
Haur_0795
KEGG: aav:Aave_4517 putative acyl protein synthase/acyl-CoA reductase-like protein.
  
     0.550
Haur_4332
PFAM: PHP domain protein; AAA-4 family protein; SMART: phosphoesterase PHP domain protein; KEGG: rrs:RoseRS_1312 AAA-4 family protein.
  
     0.538
Haur_3630
KEGG: rca:Rcas_2727 glycosyl transferase family 39.
  
     0.536
murA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.
 
    0.532
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.