STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4559TIGRFAM: aspartate racemase; PFAM: Asp/Glu racemase; KEGG: rfr:Rfer_3727 aspartate racemase. (231 aa)    
Predicted Functional Partners:
pyrB
KEGG: rrs:RoseRS_2863 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
     
 0.918
Haur_1837
PFAM: Asparaginase/glutaminase; KEGG: rrs:RoseRS_2187 asparaginase/glutaminase.
    
 0.916
Haur_3584
KEGG: rrs:RoseRS_4439 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase.
    
 0.915
Haur_3710
Asparagine synthase (glutamine-hydrolyzing); KEGG: rba:RB4577 asparagine synthetase [glutamine-hydrolyzing] 1; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase.
    
 0.915
Haur_4005
TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: tbd:Tbd_0292 asparagine synthase, glutamine-hydrolyzing.
    
 0.915
Haur_2309
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate.
     
 0.902
Haur_2511
Asparaginase; PFAM: peptidase T2 asparaginase 2; KEGG: rrs:RoseRS_0104 asparaginase.
     
  0.900
Haur_2882
PFAM: peptidase T2 asparaginase 2; KEGG: rrs:RoseRS_0104 asparaginase.
     
  0.900
Haur_3359
KEGG: dvl:Dvul_3035 asparagine synthase (glutamine-hydrolyzing).
     
  0.900
Haur_3670
PFAM: aminotransferase class I and II; KEGG: mxa:MXAN_0531 aminotransferase, class I.
    
  0.900
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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