STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4724PFAM: transcriptional activator domain; KEGG: rrs:RoseRS_4327 transcriptional activator domain. (713 aa)    
Predicted Functional Partners:
Haur_0947
Transcriptional regulator, LuxR family; PFAM: regulatory protein LuxR; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rxy:Rxyl_2946 transcriptional regulator, LuxR family.
 
  
 0.626
Haur_0269
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: AAA ATPase; Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein.
 
    0.612
Haur_1866
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: AAA ATPase; Tetratricopeptide domain protein; KEGG: rha:RHA1_ro02716 protein kinase/transcriptional regulator, LuxR family.
 
  
 0.596
Haur_1608
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein.
 
    0.592
Haur_2207
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: AAA ATPase; Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein.
 
  
 0.576
Haur_2158
ATPase-like; KEGG: gvi:glr1376 hypothetical protein.
 
    0.573
Haur_1855
Transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein.
 
  
 0.568
Haur_2114
Transcriptional regulator, XRE family; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein.
 
    0.553
Haur_1597
Tetratricopeptide TPR_4; PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; SMART: Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein.
 
    0.543
Haur_3228
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: gvi:glr1376 hypothetical protein.
 
    0.537
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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