STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4740Hypothetical protein. (211 aa)    
Predicted Functional Partners:
Haur_4741
PFAM: glycosyl transferase family 2; KEGG: rrs:RoseRS_4605 glycosyl transferase, family 2.
       0.773
Haur_4742
Integral membrane protein-like; KEGG: dge:Dgeo_2260 hypothetical protein.
       0.727
Haur_4743
PFAM: glycoside hydrolase family 57; Domain of unknown function DUF1957; KEGG: rca:Rcas_1501 domain of unknown function DUF1957; Belongs to the glycosyl hydrolase 57 family.
       0.727
Haur_4744
KEGG: bcz:BCZK2513 hypothetical protein.
       0.727
Haur_4739
PFAM: DinB family protein; KEGG: msm:MSMEG_0307 transcriptional regulator, AraC family protein.
       0.525
Haur_4738
PFAM: nitroreductase; KEGG: dge:Dgeo_1628 nitroreductase.
       0.433
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.