STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Haur_4777TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: rca:Rcas_1670 cell shape determining protein, MreB/Mrl family. (353 aa)    
Predicted Functional Partners:
Haur_4776
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.976
Haur_4774
PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: rca:Rcas_1673 peptidoglycan glycosyltransferase.
 
 
 0.955
Haur_0584
PFAM: response regulator receiver; KEGG: rca:Rcas_2286 response regulator receiver protein.
  
 
 0.848
Haur_1315
PFAM: response regulator receiver; KEGG: rca:Rcas_2890 response regulator receiver protein.
  
 
 0.848
Haur_4040
PFAM: cell cycle protein; KEGG: rca:Rcas_3131 cell cycle protein; Belongs to the SEDS family.
 
 
 0.832
Haur_4775
KEGG: rca:Rcas_1672 hypothetical protein.
       0.821
Haur_4046
Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: rrs:RoseRS_0529 helix-turn-helix domain protein.
  
 
 0.785
Haur_4773
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: lre:Lreu_0347 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.
       0.706
Haur_3814
PFAM: penicillin-binding protein transpeptidase; KEGG: rca:Rcas_3956 peptidoglycan glycosyltransferase.
 
 
 
 0.606
tig
Trigger factor domain; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.
  
   0.542
Your Current Organism:
Herpetosiphon aurantiacus
NCBI taxonomy Id: 316274
Other names: H. aurantiacus DSM 785, Herpetosiphon aurantiacus ATCC 23779, Herpetosiphon aurantiacus DSM 785
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.