Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAK27644.1 | CAK29126.1 | SynRCC307_0741 | SynRCC307_2223 | Conserved hypothetical protein. | Ferredoxin. | 0.978 |
CAK27644.1 | ahcY | SynRCC307_0741 | SynRCC307_0106 | Conserved hypothetical protein. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.900 |
CAK27644.1 | cysD | SynRCC307_0741 | SynRCC307_0795 | Conserved hypothetical protein. | O-Acetyl homoserine sulfhydrylase; Amino acid transport and metabolism. | 0.800 |
CAK27644.1 | cysK | SynRCC307_0741 | SynRCC307_0121 | Conserved hypothetical protein. | Cysteine synthase; Amino acid transport and metabolism. | 0.801 |
CAK27644.1 | cysK-2 | SynRCC307_0741 | SynRCC307_0267 | Conserved hypothetical protein. | Cysteine synthase; Amino acid transport and metabolism; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.801 |
CAK27644.1 | metH | SynRCC307_0741 | SynRCC307_1209 | Conserved hypothetical protein. | Methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.932 |
CAK27644.1 | thrA | SynRCC307_0741 | SynRCC307_0723 | Conserved hypothetical protein. | Homoserine dehydrogenase; Amino acid transport and metabolism. | 0.914 |
CAK29126.1 | CAK27644.1 | SynRCC307_2223 | SynRCC307_0741 | Ferredoxin. | Conserved hypothetical protein. | 0.978 |
CAK29126.1 | ahcY | SynRCC307_2223 | SynRCC307_0106 | Ferredoxin. | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | 0.911 |
CAK29126.1 | cysD | SynRCC307_2223 | SynRCC307_0795 | Ferredoxin. | O-Acetyl homoserine sulfhydrylase; Amino acid transport and metabolism. | 0.804 |
CAK29126.1 | cysK | SynRCC307_2223 | SynRCC307_0121 | Ferredoxin. | Cysteine synthase; Amino acid transport and metabolism. | 0.802 |
CAK29126.1 | cysK-2 | SynRCC307_2223 | SynRCC307_0267 | Ferredoxin. | Cysteine synthase; Amino acid transport and metabolism; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.802 |
CAK29126.1 | metH | SynRCC307_2223 | SynRCC307_1209 | Ferredoxin. | Methionine synthase (5-methyltetrahydrofolate--homocysteine methyltransferase); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.916 |
CAK29126.1 | thrA | SynRCC307_2223 | SynRCC307_0723 | Ferredoxin. | Homoserine dehydrogenase; Amino acid transport and metabolism. | 0.900 |
ahcY | CAK27644.1 | SynRCC307_0106 | SynRCC307_0741 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Conserved hypothetical protein. | 0.900 |
ahcY | CAK29126.1 | SynRCC307_0106 | SynRCC307_2223 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Ferredoxin. | 0.911 |
ahcY | cysD | SynRCC307_0106 | SynRCC307_0795 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | O-Acetyl homoserine sulfhydrylase; Amino acid transport and metabolism. | 0.832 |
ahcY | cysK | SynRCC307_0106 | SynRCC307_0121 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Cysteine synthase; Amino acid transport and metabolism. | 0.847 |
ahcY | cysK-2 | SynRCC307_0106 | SynRCC307_0267 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Cysteine synthase; Amino acid transport and metabolism; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.887 |
ahcY | ilvA | SynRCC307_0106 | SynRCC307_1391 | Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.832 |
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