Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAK27092.1 | CAK27093.1 | SynRCC307_0189 | SynRCC307_0190 | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | 0.448 |
CAK27092.1 | CAK27094.1 | SynRCC307_0189 | SynRCC307_0191 | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | Possible pseudogene of GDP-L fucose synthetase. | 0.408 |
CAK27093.1 | CAK27092.1 | SynRCC307_0190 | SynRCC307_0189 | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | 0.448 |
CAK27093.1 | CAK27094.1 | SynRCC307_0190 | SynRCC307_0191 | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | Possible pseudogene of GDP-L fucose synthetase. | 0.693 |
CAK27093.1 | CAK27095.1 | SynRCC307_0190 | SynRCC307_0192 | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | ABC-type multidrug transport system, ATPase and permease components; Defense mechanisms. | 0.411 |
CAK27094.1 | CAK27092.1 | SynRCC307_0191 | SynRCC307_0189 | Possible pseudogene of GDP-L fucose synthetase. | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | 0.408 |
CAK27094.1 | CAK27093.1 | SynRCC307_0191 | SynRCC307_0190 | Possible pseudogene of GDP-L fucose synthetase. | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | 0.693 |
CAK27094.1 | CAK27095.1 | SynRCC307_0191 | SynRCC307_0192 | Possible pseudogene of GDP-L fucose synthetase. | ABC-type multidrug transport system, ATPase and permease components; Defense mechanisms. | 0.449 |
CAK27095.1 | CAK27093.1 | SynRCC307_0192 | SynRCC307_0190 | ABC-type multidrug transport system, ATPase and permease components; Defense mechanisms. | Possible pseudogene of GDP-mannose 4, 6-dehydratase. | 0.411 |
CAK27095.1 | CAK27094.1 | SynRCC307_0192 | SynRCC307_0191 | ABC-type multidrug transport system, ATPase and permease components; Defense mechanisms. | Possible pseudogene of GDP-L fucose synthetase. | 0.449 |