Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAK27082.1 | CAK27106.1 | SynRCC307_0179 | SynRCC307_0203 | Glycosyltransferase; Cell envelope biogenesis, outer membrane. | Glycosyltransferase. | 0.431 |
CAK27082.1 | glgB | SynRCC307_0179 | SynRCC307_0920 | Glycosyltransferase; Cell envelope biogenesis, outer membrane. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.462 |
CAK27103.1 | CAK27104.1 | SynRCC307_0200 | SynRCC307_0201 | Uncharacterized conserved membrane protein. | Hypothetical protein. | 0.773 |
CAK27103.1 | CAK27105.1 | SynRCC307_0200 | SynRCC307_0202 | Uncharacterized conserved membrane protein. | Conserved hypothetical protein. | 0.773 |
CAK27103.1 | CAK27106.1 | SynRCC307_0200 | SynRCC307_0203 | Uncharacterized conserved membrane protein. | Glycosyltransferase. | 0.773 |
CAK27104.1 | CAK27103.1 | SynRCC307_0201 | SynRCC307_0200 | Hypothetical protein. | Uncharacterized conserved membrane protein. | 0.773 |
CAK27104.1 | CAK27105.1 | SynRCC307_0201 | SynRCC307_0202 | Hypothetical protein. | Conserved hypothetical protein. | 0.773 |
CAK27104.1 | CAK27106.1 | SynRCC307_0201 | SynRCC307_0203 | Hypothetical protein. | Glycosyltransferase. | 0.773 |
CAK27105.1 | CAK27103.1 | SynRCC307_0202 | SynRCC307_0200 | Conserved hypothetical protein. | Uncharacterized conserved membrane protein. | 0.773 |
CAK27105.1 | CAK27104.1 | SynRCC307_0202 | SynRCC307_0201 | Conserved hypothetical protein. | Hypothetical protein. | 0.773 |
CAK27105.1 | CAK27106.1 | SynRCC307_0202 | SynRCC307_0203 | Conserved hypothetical protein. | Glycosyltransferase. | 0.773 |
CAK27106.1 | CAK27082.1 | SynRCC307_0203 | SynRCC307_0179 | Glycosyltransferase. | Glycosyltransferase; Cell envelope biogenesis, outer membrane. | 0.431 |
CAK27106.1 | CAK27103.1 | SynRCC307_0203 | SynRCC307_0200 | Glycosyltransferase. | Uncharacterized conserved membrane protein. | 0.773 |
CAK27106.1 | CAK27104.1 | SynRCC307_0203 | SynRCC307_0201 | Glycosyltransferase. | Hypothetical protein. | 0.773 |
CAK27106.1 | CAK27105.1 | SynRCC307_0203 | SynRCC307_0202 | Glycosyltransferase. | Conserved hypothetical protein. | 0.773 |
CAK27106.1 | glgB | SynRCC307_0203 | SynRCC307_0920 | Glycosyltransferase. | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | 0.462 |
glgB | CAK27082.1 | SynRCC307_0920 | SynRCC307_0179 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycosyltransferase; Cell envelope biogenesis, outer membrane. | 0.462 |
glgB | CAK27106.1 | SynRCC307_0920 | SynRCC307_0203 | 1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. | Glycosyltransferase. | 0.462 |