STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAK27301.1Possible membrane-fusion protein; Cell envelope biogenesis, outer membrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (362 aa)    
Predicted Functional Partners:
CAK27302.1
Defense mechanisms; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.972
CAK28339.1
Defense mechanisms; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.881
CAK29058.1
Defense mechanisms; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.880
CAK28616.1
Cation efflux transporter, Heavy Metal Efflux (HME) family (2.A.6.1.), RND superfamily; Defense mechanisms; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.852
CAK27303.1
Uncharacterized membrane protein.
       0.778
CAK27707.1
Outer membrane efflux protein.
 
 
 0.747
tolC
Cell envelope biogenesis, outer membrane / Intracellular trafficking and secretion.
 
 
 0.726
devB
Putative outer membrane protein, efflux pump component, DevB homolog; Export of glycolopid, see Fiedler et al, 1998, Mol. Microbiol, 27(6):1193-202; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  
 0.704
CAK27300.1
Possible membrane-fusion protein; Cell envelope biogenesis, outer membrane; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
    
0.679
acrA
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.667
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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