STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAK27310.1Uncharacterized conserved membrane protein. (558 aa)    
Predicted Functional Partners:
CAK27309.1
Glycosyltransferase of family GT2.
       0.773
CAK27311.1
Sulfate permease, MFS superfamily; Inorganic ion transport and metabolism.
       0.773
CAK28497.1
Uncharacterized conserved membrane protein.
  
     0.756
CAK27166.1
Glycosyltransferase of PMT family; Cell envelope biogenesis, outer membrane.
  
     0.708
CAK27071.1
Conserved hypothetical protein; Possible frameshift with RCC0171.
  
     0.683
pyrC
Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate.
       0.572
ntrP
Nitrate/nitrite transporter, MFS family; Inorganic ion transport and metabolism.
  
     0.540
CAK27072.1
Uncharacterized protein involved in exopolysaccharide biosynthesis; Possible frameshift with RCC0170; Cell envelope biogenesis, outer membrane.
  
     0.531
CAK28707.1
Cupin, RmlC-type superfamily protein; Sugar phosphate isomerase.
  
     0.505
CAK28470.1
Conserved hypothetical protein.
  
     0.502
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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