STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAK27683.1Uncharacterized conserved membrane protein. (135 aa)    
Predicted Functional Partners:
kaiA
Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...]
  
     0.772
CAK28545.1
Uncharacterized conserved membrane protein.
  
     0.771
CAK27442.1
Conserved hypothetical protein.
  
     0.769
CAK28373.1
Conserved hypothetical protein.
  
     0.766
CAK28615.1
Conserved hypothetical protein specific to cyanobacteria.
  
     0.754
CAK29237.1
Uncharacterized conserved secreted protein.
  
     0.753
CAK27836.1
Uncharacterized conserved membrane protein.
  
     0.751
CAK28254.1
Conserved hypothetical protein.
  
     0.751
CAK27355.1
Conserved hypothetical protein.
  
     0.750
CAK28166.1
Conserved hypothetical protein.
  
     0.750
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.