STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glkGlucokinase; Carbohydrate transport and metabolism; Belongs to the bacterial glucokinase family. (347 aa)    
Predicted Functional Partners:
pgi
Glucose-6-phosphate isomerase; Carbohydrate transport and metabolism; Belongs to the GPI family.
    
 0.940
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
 
 0.937
pmg
Phosphoglucomutase; Carbohydrate transport and metabolism.
     
 0.919
kdgA
KHG/KDPG aldolase (4-hydroxy-2-oxoglutarate aldolase /2-dehydro-3-deoxyphosphogluconate aldolase); Carbohydrate transport and metabolism.
 
 
 0.919
CAK27828.1
ROK family protein.
  
 
 0.917
tktA,
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
    
 0.880
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.
    
 0.853
cbbA,
Fructose-1,6-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.
     
 0.843
fbaB
Fructose-bisphosphate aldolase class I; Carbohydrate transport and metabolism.
    
 0.816
gdh
Glucose 1-dehydrogenase; Carbohydrate transport and metabolism.
     
 0.803
Your Current Organism:
Synechococcus sp. RCC307
NCBI taxonomy Id: 316278
Other names: S. sp. RCC307, Synechococcus sp. MINSyn016-15m-01 substr. AC6A1
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