Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CAK27603.1 | CAK28628.1 | SynRCC307_0700 | SynRCC307_1725 | Uncharacterized protein wiht hemolysin-type calcium-binding regions; Possible secreted protein, possibly specific to RCC307 (compositional bias, mask the G residues in protein sequence before blast search). | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | 0.427 |
| CAK27603.1 | cphA | SynRCC307_0700 | SynRCC307_1724 | Uncharacterized protein wiht hemolysin-type calcium-binding regions; Possible secreted protein, possibly specific to RCC307 (compositional bias, mask the G residues in protein sequence before blast search). | Putative cyanophycin synthetase. | 0.477 |
| CAK28626.1 | CAK28628.1 | SynRCC307_1723 | SynRCC307_1725 | Conserved hypothetical protein. | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | 0.504 |
| CAK28626.1 | cpcS | SynRCC307_1723 | SynRCC307_1726 | Conserved hypothetical protein. | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.415 |
| CAK28626.1 | cphA | SynRCC307_1723 | SynRCC307_1724 | Conserved hypothetical protein. | Putative cyanophycin synthetase. | 0.557 |
| CAK28626.1 | trmD | SynRCC307_1723 | SynRCC307_1727 | Conserved hypothetical protein. | tRNA-(guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.415 |
| CAK28628.1 | CAK27603.1 | SynRCC307_1725 | SynRCC307_0700 | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | Uncharacterized protein wiht hemolysin-type calcium-binding regions; Possible secreted protein, possibly specific to RCC307 (compositional bias, mask the G residues in protein sequence before blast search). | 0.427 |
| CAK28628.1 | CAK28626.1 | SynRCC307_1725 | SynRCC307_1723 | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | Conserved hypothetical protein. | 0.504 |
| CAK28628.1 | cpcS | SynRCC307_1725 | SynRCC307_1726 | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.620 |
| CAK28628.1 | cphA | SynRCC307_1725 | SynRCC307_1724 | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | Putative cyanophycin synthetase. | 0.697 |
| CAK28628.1 | trmD | SynRCC307_1725 | SynRCC307_1727 | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | tRNA-(guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.630 |
| cpcS | CAK28626.1 | SynRCC307_1726 | SynRCC307_1723 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | Conserved hypothetical protein. | 0.415 |
| cpcS | CAK28628.1 | SynRCC307_1726 | SynRCC307_1725 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | 0.620 |
| cpcS | cphA | SynRCC307_1726 | SynRCC307_1724 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | Putative cyanophycin synthetase. | 0.569 |
| cpcS | trmD | SynRCC307_1726 | SynRCC307_1727 | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | tRNA-(guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.809 |
| cphA | CAK27603.1 | SynRCC307_1724 | SynRCC307_0700 | Putative cyanophycin synthetase. | Uncharacterized protein wiht hemolysin-type calcium-binding regions; Possible secreted protein, possibly specific to RCC307 (compositional bias, mask the G residues in protein sequence before blast search). | 0.477 |
| cphA | CAK28626.1 | SynRCC307_1724 | SynRCC307_1723 | Putative cyanophycin synthetase. | Conserved hypothetical protein. | 0.557 |
| cphA | CAK28628.1 | SynRCC307_1724 | SynRCC307_1725 | Putative cyanophycin synthetase. | Uncharacterized secreted protein with a autotransporter beta-domain; Secreted protein, possible HGT. | 0.697 |
| cphA | cpcS | SynRCC307_1724 | SynRCC307_1726 | Putative cyanophycin synthetase. | Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. | 0.569 |
| cphA | trmD | SynRCC307_1724 | SynRCC307_1727 | Putative cyanophycin synthetase. | tRNA-(guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family. | 0.641 |
page 1 of 2