Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CAK28635.1 | ksgA | SynRCC307_1732 | SynRCC307_1315 | Conserved hypothetical protein. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.412 |
CAK28635.1 | trmB | SynRCC307_1732 | SynRCC307_2216 | Conserved hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.540 |
CAK28635.1 | truB | SynRCC307_1732 | SynRCC307_1831 | Conserved hypothetical protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.464 |
CAK29116.1 | CAK29117.1 | SynRCC307_2213 | SynRCC307_2214 | Conserved hypothetical protein. | Uncharacterized conserved membrane protein. | 0.854 |
CAK29116.1 | CAK29118.1 | SynRCC307_2213 | SynRCC307_2215 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.624 |
CAK29116.1 | CAK29121.1 | SynRCC307_2213 | SynRCC307_2218 | Conserved hypothetical protein. | Predicted N-acetylglucosamine kinase; Carbohydrate transport and metabolism. | 0.572 |
CAK29116.1 | ictB | SynRCC307_2213 | SynRCC307_2217 | Conserved hypothetical protein. | Possible bicarbonate transporter; Inorganic ion transport and metabolism. | 0.675 |
CAK29116.1 | trmB | SynRCC307_2213 | SynRCC307_2216 | Conserved hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.572 |
CAK29117.1 | CAK29116.1 | SynRCC307_2214 | SynRCC307_2213 | Uncharacterized conserved membrane protein. | Conserved hypothetical protein. | 0.854 |
CAK29117.1 | CAK29118.1 | SynRCC307_2214 | SynRCC307_2215 | Uncharacterized conserved membrane protein. | Conserved hypothetical protein. | 0.588 |
CAK29117.1 | CAK29121.1 | SynRCC307_2214 | SynRCC307_2218 | Uncharacterized conserved membrane protein. | Predicted N-acetylglucosamine kinase; Carbohydrate transport and metabolism. | 0.572 |
CAK29117.1 | ictB | SynRCC307_2214 | SynRCC307_2217 | Uncharacterized conserved membrane protein. | Possible bicarbonate transporter; Inorganic ion transport and metabolism. | 0.640 |
CAK29117.1 | trmB | SynRCC307_2214 | SynRCC307_2216 | Uncharacterized conserved membrane protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.658 |
CAK29118.1 | CAK29116.1 | SynRCC307_2215 | SynRCC307_2213 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.624 |
CAK29118.1 | CAK29117.1 | SynRCC307_2215 | SynRCC307_2214 | Conserved hypothetical protein. | Uncharacterized conserved membrane protein. | 0.588 |
CAK29118.1 | CAK29121.1 | SynRCC307_2215 | SynRCC307_2218 | Conserved hypothetical protein. | Predicted N-acetylglucosamine kinase; Carbohydrate transport and metabolism. | 0.783 |
CAK29118.1 | ictB | SynRCC307_2215 | SynRCC307_2217 | Conserved hypothetical protein. | Possible bicarbonate transporter; Inorganic ion transport and metabolism. | 0.783 |
CAK29118.1 | trmB | SynRCC307_2215 | SynRCC307_2216 | Conserved hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.789 |
CAK29121.1 | CAK29116.1 | SynRCC307_2218 | SynRCC307_2213 | Predicted N-acetylglucosamine kinase; Carbohydrate transport and metabolism. | Conserved hypothetical protein. | 0.572 |
CAK29121.1 | CAK29117.1 | SynRCC307_2218 | SynRCC307_2214 | Predicted N-acetylglucosamine kinase; Carbohydrate transport and metabolism. | Uncharacterized conserved membrane protein. | 0.572 |
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