node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
hcrA | pspE | SynRCC307_2272 | SynRCC307_2273 | Heat-inducible transcription repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | Putative rhodanese-related sulfurtransferase. | 0.730 |
menE | pspE | SynRCC307_2255 | SynRCC307_2273 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | Putative rhodanese-related sulfurtransferase. | 0.660 |
menE | rplC | SynRCC307_2255 | SynRCC307_2116 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.880 |
menE | rplK | SynRCC307_2255 | SynRCC307_2358 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.798 |
menE | rplM | SynRCC307_2255 | SynRCC307_2142 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.897 |
menE | rplQ | SynRCC307_2255 | SynRCC307_2140 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | 50S ribosomal protein L17; Translation, ribosomal structure and biogenesis. | 0.836 |
menE | rplU | SynRCC307_2255 | SynRCC307_1827 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.836 |
menE | rpsQ-2 | SynRCC307_2255 | SynRCC307_2125 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.849 |
menE | sodB | SynRCC307_2255 | SynRCC307_1791 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.801 |
menE | ybeY | SynRCC307_2255 | SynRCC307_2246 | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.783 |
pspE | hcrA | SynRCC307_2273 | SynRCC307_2272 | Putative rhodanese-related sulfurtransferase. | Heat-inducible transcription repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.730 |
pspE | menE | SynRCC307_2273 | SynRCC307_2255 | Putative rhodanese-related sulfurtransferase. | O-succinylbenzoate-CoA ligase; Coenzyme metabolism. | 0.660 |
pspE | rplC | SynRCC307_2273 | SynRCC307_2116 | Putative rhodanese-related sulfurtransferase. | 50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.653 |
pspE | rplK | SynRCC307_2273 | SynRCC307_2358 | Putative rhodanese-related sulfurtransferase. | 50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.662 |
pspE | rplM | SynRCC307_2273 | SynRCC307_2142 | Putative rhodanese-related sulfurtransferase. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.663 |
pspE | rplQ | SynRCC307_2273 | SynRCC307_2140 | Putative rhodanese-related sulfurtransferase. | 50S ribosomal protein L17; Translation, ribosomal structure and biogenesis. | 0.669 |
pspE | rplU | SynRCC307_2273 | SynRCC307_1827 | Putative rhodanese-related sulfurtransferase. | 50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.664 |
pspE | rpsQ-2 | SynRCC307_2273 | SynRCC307_2125 | Putative rhodanese-related sulfurtransferase. | 30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.709 |
pspE | sodB | SynRCC307_2273 | SynRCC307_1791 | Putative rhodanese-related sulfurtransferase. | Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.783 |
pspE | ybeY | SynRCC307_2273 | SynRCC307_2246 | Putative rhodanese-related sulfurtransferase. | Predicted metal-dependent hydrolase; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.749 |