STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbbLRibulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. Belongs to the RuBisCO large chain family. Type I subfamily. (470 aa)    
Predicted Functional Partners:
ABB26571.1
Ribulose 1,5-bisphosphate carboxylase small subunit.
 
 0.999
ABB25757.1
Phosphoribulokinase.
 
 
 0.979
pgk
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.913
ABB26825.1
Conserved hypothetical protein.
     
 0.905
ABB26118.1
Conserved hypothetical protein.
     
  0.900
ABB26573.1
Carboxysome shell peptide, CsoS1.
     
 0.840
mtnD
Methionine salvage pathway enzyme E-2/E-2' -like; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.
  
  
 0.815
ABB26391.1
Possible carbonic anhydrase.
    
 
 0.791
ABB26570.1
Putative carboxysome structural peptide CsoS2.
 
   
 0.739
ABB26569.1
Putative carboxysome shell polypeptide CsoS3.
 
   
 0.710
Your Current Organism:
Synechococcus sp. CC9902
NCBI taxonomy Id: 316279
Other names: S. sp. CC9902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.