Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANZ13817.1Hypothetical protein. (145 aa)    
Predicted Functional Partners:
rtcB
RNA-splicing ligase RtcB; Belongs to the RtcB family.
 
 0.962
ANZ17803.1
RNA ligase.
  
 0.922
ANZ14776.1
Hypothetical protein.
 
    0.746
ANZ14676.1
Protein of unknown function (DUF2795).
 
    0.722
ANZ20002.1
Putative phosphoribosyl transferase.
 
    0.716
ANZ20426.1
Hypothetical protein.
 
    0.687
ANZ13807.1
Putative phosphoribosyl transferase.
  
    0.680
ANZ20001.1
Hypothetical protein.
  
    0.673
Your Current Organism:
Streptomyces noursei
NCBI taxonomy Id: 316284
Other names: S. noursei ATCC 11455, Streptomyces noursei ATCC 11455, Streptomyces noursei str. ATCC 11455, Streptomyces noursei strain ATCC 11455
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