Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANZ13330.1 | ANZ17184.1 | SNOUR_00050 | SNOUR_19450 | Single-strand binding protein. | DNA polymerase III subunit delta'. | 0.867 |
ANZ13330.1 | ANZ17254.1 | SNOUR_00050 | SNOUR_19805 | Single-strand binding protein. | DNA polymerase III subunits gamma and tau. | 0.774 |
ANZ13330.1 | ANZ17472.1 | SNOUR_00050 | SNOUR_20925 | Single-strand binding protein. | Single-strand binding protein. | 0.900 |
ANZ13330.1 | ANZ18646.1 | SNOUR_00050 | SNOUR_26960 | Single-strand binding protein. | Single-strand DNA-binding protein. | 0.940 |
ANZ13330.1 | priA-2 | SNOUR_00050 | SNOUR_33090 | Single-strand binding protein. | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.825 |
ANZ13330.1 | rplI | SNOUR_00050 | SNOUR_21075 | Single-strand binding protein. | 50S ribosomal protein L9; Binds to the 23S rRNA. | 0.583 |
ANZ13330.1 | rpsF | SNOUR_00050 | SNOUR_21090 | Single-strand binding protein. | 30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA. | 0.754 |
ANZ13330.1 | ssb1 | SNOUR_00050 | SNOUR_21085 | Single-strand binding protein. | Single-stranded DNA-binding protein 1. | 0.906 |
ANZ17184.1 | ANZ13330.1 | SNOUR_19450 | SNOUR_00050 | DNA polymerase III subunit delta'. | Single-strand binding protein. | 0.867 |
ANZ17184.1 | ANZ17254.1 | SNOUR_19450 | SNOUR_19805 | DNA polymerase III subunit delta'. | DNA polymerase III subunits gamma and tau. | 0.997 |
ANZ17184.1 | ANZ17472.1 | SNOUR_19450 | SNOUR_20925 | DNA polymerase III subunit delta'. | Single-strand binding protein. | 0.714 |
ANZ17184.1 | ANZ18646.1 | SNOUR_19450 | SNOUR_26960 | DNA polymerase III subunit delta'. | Single-strand DNA-binding protein. | 0.846 |
ANZ17184.1 | priA-2 | SNOUR_19450 | SNOUR_33090 | DNA polymerase III subunit delta'. | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.876 |
ANZ17184.1 | ssb1 | SNOUR_19450 | SNOUR_21085 | DNA polymerase III subunit delta'. | Single-stranded DNA-binding protein 1. | 0.793 |
ANZ17254.1 | ANZ13330.1 | SNOUR_19805 | SNOUR_00050 | DNA polymerase III subunits gamma and tau. | Single-strand binding protein. | 0.774 |
ANZ17254.1 | ANZ17184.1 | SNOUR_19805 | SNOUR_19450 | DNA polymerase III subunits gamma and tau. | DNA polymerase III subunit delta'. | 0.997 |
ANZ17254.1 | ANZ17472.1 | SNOUR_19805 | SNOUR_20925 | DNA polymerase III subunits gamma and tau. | Single-strand binding protein. | 0.722 |
ANZ17254.1 | ANZ18646.1 | SNOUR_19805 | SNOUR_26960 | DNA polymerase III subunits gamma and tau. | Single-strand DNA-binding protein. | 0.802 |
ANZ17254.1 | priA-2 | SNOUR_19805 | SNOUR_33090 | DNA polymerase III subunits gamma and tau. | Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily. | 0.735 |
ANZ17254.1 | ssb1 | SNOUR_19805 | SNOUR_21085 | DNA polymerase III subunits gamma and tau. | Single-stranded DNA-binding protein 1. | 0.768 |
page 1 of 4