Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ANZ17803.1RNA ligase. (397 aa)    
Predicted Functional Partners:
ANZ13817.1
Hypothetical protein.
  
 0.922
ANZ17802.1
Hypothetical protein.
       0.752
ANZ16279.1
Helicase.
   
 0.682
ANZ17801.1
Hypothetical protein.
       0.654
ANZ14776.1
Hypothetical protein.
  
    0.530
ANZ20001.1
Hypothetical protein.
  
    0.530
ANZ14676.1
Protein of unknown function (DUF2795).
  
    0.499
ANZ20426.1
Hypothetical protein.
  
    0.499
ANZ14098.1
Hypothetical protein.
   
 0.472
ANZ15243.1
Putative DEAD-box RNA helicase.
   
 0.472
Your Current Organism:
Streptomyces noursei
NCBI taxonomy Id: 316284
Other names: S. noursei ATCC 11455, Streptomyces noursei ATCC 11455, Streptomyces noursei str. ATCC 11455, Streptomyces noursei strain ATCC 11455
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