Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETK31984.1 | ETK35588.1 | MPTA5024_32010 | MPTA5024_13645 | Anti-sigma factor. | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | 0.420 |
ETK33183.1 | ETK35588.1 | MPTA5024_26075 | MPTA5024_13645 | Hypothetical protein. | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | 0.444 |
ETK33183.1 | rpoA | MPTA5024_26075 | MPTA5024_25885 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
ETK33183.1 | rpoC | MPTA5024_26075 | MPTA5024_26070 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
ETK33183.1 | rpoZ | MPTA5024_26075 | MPTA5024_09530 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.999 |
ETK34737.1 | ETK35588.1 | MPTA5024_17680 | MPTA5024_13645 | Anti-sigma factor, ChrR. | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | 0.442 |
ETK35586.1 | ETK35587.1 | MPTA5024_13635 | MPTA5024_13640 | Hypothetical protein. | Membrane protein. | 0.491 |
ETK35586.1 | ETK35588.1 | MPTA5024_13635 | MPTA5024_13645 | Hypothetical protein. | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | 0.491 |
ETK35587.1 | ETK35586.1 | MPTA5024_13640 | MPTA5024_13635 | Membrane protein. | Hypothetical protein. | 0.491 |
ETK35587.1 | ETK35588.1 | MPTA5024_13640 | MPTA5024_13645 | Membrane protein. | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | 0.779 |
ETK35587.1 | ETK35589.1 | MPTA5024_13640 | MPTA5024_13650 | Membrane protein. | Hypothetical protein. | 0.523 |
ETK35588.1 | ETK31984.1 | MPTA5024_13645 | MPTA5024_32010 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | Anti-sigma factor. | 0.420 |
ETK35588.1 | ETK33183.1 | MPTA5024_13645 | MPTA5024_26075 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.444 |
ETK35588.1 | ETK34737.1 | MPTA5024_13645 | MPTA5024_17680 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | Anti-sigma factor, ChrR. | 0.442 |
ETK35588.1 | ETK35586.1 | MPTA5024_13645 | MPTA5024_13635 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.491 |
ETK35588.1 | ETK35587.1 | MPTA5024_13645 | MPTA5024_13640 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | Membrane protein. | 0.779 |
ETK35588.1 | ETK35589.1 | MPTA5024_13645 | MPTA5024_13650 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.523 |
ETK35588.1 | ETK37679.1 | MPTA5024_13645 | MPTA5024_02960 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.444 |
ETK35588.1 | rpoA | MPTA5024_13645 | MPTA5024_25885 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.463 |
ETK35588.1 | rpoC | MPTA5024_13645 | MPTA5024_26070 | RNA polymerase subunit sigma-24; Belongs to the sigma-70 factor family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.533 |
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