STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ETK35182.1Hypothetical protein. (340 aa)    
Predicted Functional Partners:
ETK35180.1
ABC transporter permease.
 
     0.945
ETK35181.1
Peptide ABC transporter ATP-binding protein.
 
     0.860
ETK35544.1
Hypothetical protein.
 
     0.787
ETK35543.1
ABC transporter permease.
 
     0.776
ETK32214.1
ABC transporter permease.
 
     0.776
ETK36192.1
ABC transporter permease.
 
     0.772
ETK32994.1
ABC transporter permease.
 
     0.769
ETK32270.1
ABC transporter permease.
 
     0.763
ETK34079.1
Hypothetical protein.
 
     0.755
ETK32211.1
Hypothetical protein.
  
     0.753
Your Current Organism:
Microbispora sp. ATCC PTA5024
NCBI taxonomy Id: 316330
Other names: M. sp. ATCC PTA-5024, Microbispora sp. ATCC PTA-5024
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.