Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ETK33017.1 | ETK33844.1 | MPTA5024_26725 | MPTA5024_22370 | Hypothetical protein. | Hypothetical protein. | 0.496 |
ETK33842.1 | ETK33843.1 | MPTA5024_22360 | MPTA5024_22365 | Alpha/beta hydrolase. | Alpha/beta hydrolase. | 0.609 |
ETK33842.1 | ETK33844.1 | MPTA5024_22360 | MPTA5024_22370 | Alpha/beta hydrolase. | Hypothetical protein. | 0.550 |
ETK33842.1 | ETK33845.1 | MPTA5024_22360 | MPTA5024_22375 | Alpha/beta hydrolase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.419 |
ETK33843.1 | ETK33842.1 | MPTA5024_22365 | MPTA5024_22360 | Alpha/beta hydrolase. | Alpha/beta hydrolase. | 0.609 |
ETK33843.1 | ETK33844.1 | MPTA5024_22365 | MPTA5024_22370 | Alpha/beta hydrolase. | Hypothetical protein. | 0.751 |
ETK33843.1 | ETK33845.1 | MPTA5024_22365 | MPTA5024_22375 | Alpha/beta hydrolase. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.560 |
ETK33844.1 | ETK33017.1 | MPTA5024_22370 | MPTA5024_26725 | Hypothetical protein. | Hypothetical protein. | 0.496 |
ETK33844.1 | ETK33842.1 | MPTA5024_22370 | MPTA5024_22360 | Hypothetical protein. | Alpha/beta hydrolase. | 0.550 |
ETK33844.1 | ETK33843.1 | MPTA5024_22370 | MPTA5024_22365 | Hypothetical protein. | Alpha/beta hydrolase. | 0.751 |
ETK33844.1 | ETK33845.1 | MPTA5024_22370 | MPTA5024_22375 | Hypothetical protein. | 3-hydroxybutyryl-CoA dehydrogenase. | 0.660 |
ETK33844.1 | ETK33855.1 | MPTA5024_22370 | MPTA5024_22425 | Hypothetical protein. | Hypothetical protein. | 0.764 |
ETK33844.1 | ETK37679.1 | MPTA5024_22370 | MPTA5024_02960 | Hypothetical protein. | Hypothetical protein. | 0.444 |
ETK33844.1 | nucS | MPTA5024_22370 | MPTA5024_22390 | Hypothetical protein. | Hypothetical protein; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family. | 0.618 |
ETK33844.1 | rpoA | MPTA5024_22370 | MPTA5024_25885 | Hypothetical protein. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.463 |
ETK33844.1 | rpoC | MPTA5024_22370 | MPTA5024_26070 | Hypothetical protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.533 |
ETK33844.1 | rpoZ | MPTA5024_22370 | MPTA5024_09530 | Hypothetical protein. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.463 |
ETK33845.1 | ETK33842.1 | MPTA5024_22375 | MPTA5024_22360 | 3-hydroxybutyryl-CoA dehydrogenase. | Alpha/beta hydrolase. | 0.419 |
ETK33845.1 | ETK33843.1 | MPTA5024_22375 | MPTA5024_22365 | 3-hydroxybutyryl-CoA dehydrogenase. | Alpha/beta hydrolase. | 0.560 |
ETK33845.1 | ETK33844.1 | MPTA5024_22375 | MPTA5024_22370 | 3-hydroxybutyryl-CoA dehydrogenase. | Hypothetical protein. | 0.660 |
page 1 of 3